Sotabase

Career

· Researcher / PhD Student, UC Berkeley EECS Department2025–
· PhD Student, UC Berkeley Berkeley Artificial Intelligence Research Lab (BAIR)2022–

Publications (71)

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics
Nature Communications · 2016
969
cited
The role of submicroscopic parasitemia in malaria transmission: what is the evidence?
Trends in Parasitology · 2014
236
cited
The impact of rare variation on gene expression across tissues
Nature · 2016
234
cited
Dihydroartemisinin-piperaquine failure associated with a triple mutant including kelch13 C580Y in Cambodia: an observational cohort study.
Lancet. Infectious Diseases (Print) · 2015
225
cited
Drug-Resistant Malaria: The Era of ACT
Current Infectious Disease Reports · 2010
125
cited
Association of a Novel Mutation in the Plasmodium falciparum Chloroquine Resistance Transporter With Decreased Piperaquine Sensitivity
Journal of Infectious Diseases · 2017
112
cited
Using Amplicon Deep Sequencing to Detect Genetic Signatures of Plasmodium vivax Relapse.
Journal of Infectious Diseases · 2015
79
cited
Artesunate Dose Escalation for the Treatment of Uncomplicated Malaria in a Region of Reported Artemisinin Resistance: A Randomized Clinical Trial
PLoS ONE · 2011
77
cited
A novel CRISPR-based malaria diagnostic capable of Plasmodium detection, species differentiation, and drug-resistance genotyping
EBioMedicine · 2021
75
cited
Field evaluation of a real-time fluorescence loop-mediated isothermal amplification assay, RealAmp, for the diagnosis of malaria in Thailand and India.
Journal of Infectious Diseases · 2014
75
cited
Ex Vivo Drug Susceptibility Testing and Molecular Profiling of Clinical Plasmodium falciparum Isolates from Cambodia from 2008 to 2013 Suggest Emerging Piperaquine Resistance
Antimicrobial Agents and Chemotherapy · 2015
69
cited
Dose-dependent risk of neutropenia after 7-day courses of artesunate monotherapy in Cambodian patients with acute Plasmodium falciparum malaria.
Clinical Infectious Diseases · 2010
62
cited
Lipid A’s Structure Mediates Neisseria gonorrhoeae Fitness during Experimental Infection of Mice and Men
mBio · 2013
57
cited
Partner-Drug Resistance and Population Substructuring of Artemisinin-Resistant Plasmodium falciparum in Cambodia
Genome Biology and Evolution · 2017
57
cited
Efficacy of Two versus Three-Day Regimens of Dihydroartemisinin-Piperaquine for Uncomplicated Malaria in Military Personnel in Northern Cambodia: An Open-Label Randomized Trial
PLoS ONE · 2014
56
cited
Microscopic Plasmodium falciparum Gametocytemia and Infectivity to Mosquitoes in Cambodia.
Journal of Infectious Diseases · 2016
53
cited
Therapeutic Effects of Monoclonal Antibody against Dengue Virus NS1 in a STAT1 Knockout Mouse Model of Dengue Infection
Journal of Immunology · 2017
48
cited
Selective sweep suggests transcriptional regulation may underlie Plasmodium vivax resilience to malaria control measures in Cambodia
Proceedings of the National Academy of Sciences of the United States of America · 2016
46
cited
Key Knowledge Gaps for Plasmodium vivax Control and Elimination
American Journal of Tropical Medicine and Hygiene · 2016
43
cited
Plasmodium vivax isolates from Cambodia and Thailand show high genetic complexity and distinct patterns of P. vivax multidrug resistance gene 1 (pvmdr1) polymorphisms.
American Journal of Tropical Medicine and Hygiene · 2013
40
cited
Sotabase
Jessica Lin | Researcher Profile | Sotabase | Sotabase