Sotabase

Career

· Staff Engineer, Achira2025–
· Staff Engineer, insitro2019–2025
· Ph.D. in Biophysics, Stanford University2019–
· Consultant, Various startups2018–2019
· B.S. in Bioinformatics, UC San Diego2014–
· Researcher, Amgen Scholars Program2013–
· Intern/Employee, Pfizer, Inc2012–2013
· Software Engineer, San Diego Supercomputer Center2011–2014
· Programmer, Calit22010–2011
· Scientist/Researcher, National Oceanic and Atmospheric Administration2010–

Publications (23)

Lipid14: The Amber Lipid Force Field
Journal of Chemical Theory and Computation · 2014
1,106
cited
Crystal Structure of an LSD-Bound Human Serotonin Receptor
Cell · 2017
388
cited
D4 dopamine receptor high-resolution structures enable the discovery of selective agonists
Science · 2017
216
cited
GAFFlipid: a General Amber Force Field for the accurate molecular dynamics simulation of phospholipid
2012
209
cited
Structure-inspired design of β-arrestin-biased ligands for aminergic GPCRs
Nature Chemical Biology · 2017
155
cited
Diverse GPCRs exhibit conserved water networks for stabilization and activation
Proceedings of the National Academy of Sciences of the United States of America · 2019
136
cited
Structural and Functional Analysis of a β2-Adrenergic Receptor Complex with GRK5
Cell · 2017
133
cited
Structural basis for σ1 receptor ligand recognition
Nature Structural & Molecular Biology · 2018
122
cited
Paramfit: Automated optimization of force field parameters for molecular dynamics simulations
Journal of Computational Chemistry · 2015
118
cited
How Effectively Can Adaptive Sampling Methods Capture Spontaneous Ligand Binding?
Journal of Chemical Theory and Computation · 2019
47
cited
Reversible versus irreversible inhibition modes of ERK2: a comparative analysis for ERK2 protein kinase in cancer therapy.
Future Medicinal Chemistry · 2018
43
cited
Amber 2015, University of California, San Francisco
2015
36
cited
Human sigma-1 receptor bound to (+)-pentazocine
2018
19
cited
1 Structural and Functional Analysis of a β 2-Adrenergic Receptor Complex with GRK 5
2018
14
cited
An investigation of the effects of hard and soft errors on graphics processing unit‐accelerated molecular dynamics simulations
Concurrency and Computation · 2014
10
cited
Exploring the Structural Mechanism of Covalently Bound E3 Ubiquitin Ligase: Catalytic or Allosteric Inhibition?
The Protein Journal · 2018
9
cited
Implementing continuous integration software in an established computational chemistry software package
2013 5th International Workshop on Software Engineering for Computational Science and Engineering (SE-CSE) · 2013
9
cited
An investigation of the effects of error correcting code on GPU-accelerated molecular dynamics simulations
Extreme Science and Engineering Discovery Environment · 2013
5
cited
Streamlining Development of a Multimillion-Line Computational Chemistry Code
Computing in science & engineering (Print) · 2014
4
cited
Stable networks of water-mediated interactions are conserved in activation of diverse GPCRs
bioRxiv · 2018
2
cited
Sotabase
Robin Betz | Researcher Profile | Sotabase | Sotabase