Sotabase

Career

· PhD student in EECS, UC Berkeley2022–

Publications (54)

Predicting human microRNA-disease associations based on support vector machine
IEEE International Conference on Bioinformatics and Biomedicine · 2010
213
cited
LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data
BMC Genomics · 2015
132
cited
LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression
Nucleic Acids Res. · 2014
129
cited
Gene expression data analysis using Hellinger correlation in weighted gene co-expression networks (WGCNA)
Computational and Structural Biotechnology Journal · 2022
44
cited
SIDD: A Semantically Integrated Database towards a Global View of Human Disease
PLoS ONE · 2013
42
cited
iEnhancer-EBLSTM: Identifying Enhancers and Strengths by Ensembles of Bidirectional Long Short-Term Memory
Frontiers in Genetics · 2021
36
cited
Complex genome assembly based on long-read sequencing
Briefings Bioinform. · 2022
24
cited
Dysregulation of Human Somatic piRNA Expression in Parkinson’s Disease Subtypes and Stages
International Journal of Molecular Sciences · 2022
22
cited
Weighted Network-Based Inference of Human MicroRNA-Disease Associations
2010 Fifth International Conference on Frontier of Computer Science and Technology · 2010
22
cited
Application of Multilayer Network Models in Bioinformatics
Frontiers in Genetics · 2021
20
cited
Spectrum Analysis of Albinism Genes in A Large Cohort of Chinese Index Patients.
Journal of Investigative Dermatology · 2021
19
cited
Effects of DNA Methylation on TFs in Human Embryonic Stem Cells
Frontiers in Genetics · 2021
18
cited
Genetic variants and mutational spectrum of Chinese Hermansky–Pudlak syndrome patients
Pigment Cell & Melanoma Research · 2020
17
cited
KK-DBP: A Multi-Feature Fusion Method for DNA-Binding Protein Identification Based on Random Forest
Frontiers in Genetics · 2021
15
cited
Chromosome‐level genome assembly of a triploid poplar Populus alba ‘Berolinensis’
Molecular Ecology Resources · 2023
14
cited
DeepITEH: a deep learning framework for identifying tissue-specific eRNAs from the human genome
Bioinform. · 2023
12
cited
PIWI-interacting RNAs in human diseases: databases and computational models
Briefings Bioinform. · 2022
12
cited
DeepICSH: a complex deep learning framework for identifying cell-specific silencers and their strength from the human genome
Briefings Bioinform. · 2023
11
cited
Observation of the semimuonic decay D+→ωμ+νμ
2020
11
cited
The first Hermansky–Pudlak syndrome type 9 patient with two novel variants in Chinese population
Journal of dermatology (Print) · 2021
11
cited
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Tianjiao Zhang | Researcher Profile | Sotabase | Sotabase