Sotabase

Career

· Research Member of Common Room, Senior Research Lecturer, Kellogg College, University of Oxford2024–
· Contributor to databases, tools, and data standards for Omics technologies, European Bioinformatics Institute (EBI)2010–
· Group Coordinator and Co-Investigator, Oxford e-Research Centre
· Researcher, Oxford e-Research Centre

Publications (180)

The FAIR Guiding Principles for scientific data management and stewardship
Scientific Data · 2016
14,118
cited
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
Nature Biotechnology · 2007
2,764
cited
ArrayExpress—a public repository for microarray gene expression data at the EBI
Nucleic Acids Res. · 2004
1,207
cited
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control consortium
Nature Biotechnology · 2014
915
cited
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
Nature Biotechnology · 2011
717
cited
Mutation spectrum and genotype-phenotype analyses in Cowden disease and Bannayan-Zonana syndrome, two hamartoma syndromes with germline PTEN mutation.
Human Molecular Genetics · 1998
684
cited
MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data
Nucleic Acids Res. · 2012
612
cited
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
Nature Biotechnology · 2008
563
cited
EnsMart: a generic system for fast and flexible access to biological data.
Genome Research · 2003
461
cited
ArrayExpress update—from an archive of functional genomics experiments to the atlas of gene expression
Nucleic Acids Res. · 2008
456
cited
Toward interoperable bioscience data
Nature Genetics · 2012
423
cited
FAIR Principles: Interpretations and Implementation Considerations
Data Intelligence · 2020
353
cited
The Ontology for Biomedical Investigations
PLoS ONE · 2016
346
cited
FAIRsharing as a community approach to standards, repositories and policies
Nature Biotechnology · 2019
297
cited
The MGED Ontology: a resource for semantics-based description of microarray experiments
Bioinform. · 2006
216
cited
Use cases, best practice and reporting standards for metabolomics in regulatory toxicology
Nature Communications · 2019
170
cited
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
Metabolomics · 2015
160
cited
Evaluating FAIR maturity through a scalable, automated, community-governed framework
Scientific Data · 2019
157
cited
MetaboLights: An Open‐Access Database Repository for Metabolomics Data
Current Protocols in Bioinformatics · 2016
155
cited
A simple spreadsheet-based , MIAME-supportive format for microarray data
2006
152
cited
Sotabase
Philippe Rocca-Serra | Researcher Profile | Sotabase | Sotabase