Sotabase

Career

· Postdoctoral Researcher, University of Washington2025–

Publications (23)

Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses
Nature Communications · 2020
138
cited
Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay
eLife · 2020
101
cited
Pancake: Frequency Smoothing for Encrypted Data Stores
USENIX Security Symposium · 2020
82
cited
Protocols for Checking Compromised Credentials
Conference on Computer and Communications Security · 2019
74
cited
Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens
mBio · 2019
73
cited
Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19
EClinicalMedicine · 2020
68
cited
Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2
medRxiv · 2020
46
cited
Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: a comparison of patients with and without COVID-19
medRxiv · 2020
33
cited
Investigating Transfusion-related Sepsis Using Culture-Independent Metagenomic Sequencing
bioRxiv · 2019
31
cited
Estimation of Secondary Household Attack Rates for Emergent Spike L452R Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants Detected by Genomic Surveillance at a Community-Based Testing Site in San Francisco
Clinical Infectious Diseases · 2021
26
cited
Estimation of secondary household attack rates for emergent SARS-CoV-2 variants detected by genomic surveillance at a community-based testing site in San Francisco
medRxiv · 2021
25
cited
Understanding Research Related to Designing for Children's Privacy and Security: A Document Analysis
International Conference on Interaction Design and Children · 2023
19
cited
Sentinel Case of Candida auris in the Western United States Following Prolonged Occult Colonization in a Returned Traveler from India
Microbial Drug Resistance · 2019
16
cited
The Local Forking Lemma and its Application to Deterministic Encryption
IACR Cryptology ePrint Archive · 2019
15
cited
Prolonged silent carriage, genomic virulence potential and transmission between staff and patients characterize a neonatal intensive care unit (NICU) outbreak of methicillin-resistant Staphylococcus aureus (MRSA)
Infection control and hospital epidemiology · 2022
14
cited
Genomic Epidemiology and Transmission Dynamics of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in Congregate Healthcare Facilities in Santa Clara County, California
Clinical Infectious Diseases · 2021
9
cited
The impact of the COVID-19 preventive measures on influenza transmission: molecular and epidemiological evidence
International Journal of Infectious Diseases · 2021
9
cited
Upper airway gene expression shows a more robust adaptive immune response to SARS-CoV-2 in children
Nature Communications · 2022
9
cited
Bergeyella cardium: Clinical Characteristics and Draft Genome of an Emerging Pathogen in Native and Prosthetic Valve Endocarditis
Open Forum Infectious Diseases · 2019
7
cited
Single mosquito metatranscriptomics recovers mosquito species, blood meal sources, and microbial cargo, including viral dark matter
bioRxiv · 2020
7
cited
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