Sotabase

Career

· Professor, Iowa State University2024–
· Associate Professor, Iowa State University2020–2024
· Postdoctoral Research Fellow, Stanford University2010–2015
· Ph.D., Genomics and Computational Biology, University of Pennsylvania2009–
· B.A., Computer Science, Boston University2004–
· Assistant Professor, Iowa State University

Publications (79)

Foxa1 and Foxa2 Are Essential for Sexual Dimorphism in Liver Cancer
Cell · 2012
375
cited
TissueEnrich: Tissue-specific gene enrichment analysis
Bioinform. · 2018
227
cited
Cell-Specific Determinants of Peroxisome Proliferator-Activated Receptor γ Function in Adipocytes and Macrophages
Molecular and Cellular Biology · 2010
226
cited
Foxa2 and H2A.Z Mediate Nucleosome Depletion during Embryonic Stem Cell Differentiation
Cell · 2012
206
cited
SnapShot:Forkhead Transcription Factors I
Cell · 2007
143
cited
Foxa1 and Foxa2 regulate bile duct development in mice.
Journal of Clinical Investigation · 2009
127
cited
Extracting transcription factor targets from ChIP-Seq data
Nucleic Acids Research · 2009
119
cited
Bisphenol A and bisphenol S disruptions of the mouse placenta and potential effects on the placenta–brain axis
Proceedings of the National Academy of Sciences of the United States of America · 2020
114
cited
CRTC2 (TORC2) contributes to the transcriptional response to fasting in the liver but is not required for the maintenance of glucose homeostasis.
Cell Metabolism · 2009
99
cited
SnapShot: Forkhead Transcription Factors II
Cell · 2007
84
cited
The Nucleosome Map of the Mammalian Liver
Nature Structural &Molecular Biology · 2011
81
cited
Combined analysis of dissimilar promoter accessibility and gene expression profiles identifies tissue-specific genes and actively repressed networks
Epigenetics & Chromatin · 2019
77
cited
Species-specific strategies underlying conserved functions of metabolic transcription factors.
Molecular Endocrinology · 2011
72
cited
Early onset preeclampsia in a model for human placental trophoblast
Proceedings of the National Academy of Sciences of the United States of America · 2019
63
cited
Forkhead transcription factors II.
Cell · 2007
47
cited
Cis-regulatory modules in the mammalian liver: composition depends on strength of Foxa2 consensus site
Nucleic Acids Research · 2008
42
cited
Changes in the enhancer landscape during early placental development uncover a trophoblast invasion gene-enhancer network.
Placenta · 2016
36
cited
Deciphering transcriptional regulation in human embryonic stem cells specified towards a trophoblast fate
Scientific Reports · 2017
36
cited
The Enhancer Landscape during Early Neocortical Development Reveals Patterns of Dense Regulation and Co-option
PLoS Genetics · 2013
34
cited
PlacentaCellEnrich: A tool to characterize gene sets using placenta cell-specific gene enrichment analysis.
Placenta · 2020
32
cited
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