Sotabase

Career

· Visiting Professor, Harvard University2012–2012
· Professor of Computer Science, Computation and Neural Systems, and Bioengineering, California Institute of Technology1999–
· Visiting Researcher, MIT Artificial Intelligence Laboratory1999–2000
· Ph.D., Computation & Neural Systems, California Institute of Technology1998–
· Lewis Thomas Postdoctoral Fellow, Princeton University1998–1999
· B.S. with Honors, Mathematics (spec. in Computer Science), University of Chicago1991–
· Research Assistant, Wolfram Research, Inc.1990–1992
· Budapest Semesters in Mathematics, Budapest Technological Institute, Hungary1989–

Publications (100)

Control of DNA strand displacement kinetics using toehold exchange.
Journal of the American Chemical Society · 2009
1,265
cited
Engineering Entropy-Driven Reactions and Networks Catalyzed by DNA
Science · 2007
1,102
cited
Neural network computation with DNA strand displacement cascades
Nature · 2011
985
cited
Molecular robots guided by prescriptive landscapes
Nature · 2010
840
cited
DNA as a universal substrate for chemical kinetics
Proceedings of the National Academy of Sciences of the United States of America · 2009
743
cited
Self-assembly of carbon nanotubes into two-dimensional geometries using DNA origami templates.
Nature Nanotechnology · 2010
598
cited
Scaling Up Digital Circuit Computation with DNA Strand Displacement Cascades
Science · 2011
498
cited
On the biophysics and kinetics of toehold-mediated DNA strand displacement
Nucleic Acids Research · 2013
468
cited
Thermodynamic Analysis of Interacting Nucleic Acid Strands
SIAM Review · 2007
365
cited
Synthetic in vitro transcriptional oscillators
Molecular Systems Biology · 2011
331
cited
Construction of an in vitro bistable circuit from synthetic transcriptional switches
Molecular Systems Biology · 2006
316
cited
Enzyme-free nucleic acid dynamical systems
Science · 2017
311
cited
An autonomous polymerization motor powered by DNA hybridization
Nature Nanotechnology · 2007
310
cited
A simple DNA gate motif for synthesizing large-scale circuits
Journal of the Royal Society Interface · 2009
304
cited
Computation with finite stochastic chemical reaction networks
Natural Computing · 2008
292
cited
Diverse and robust molecular algorithms using reprogrammable DNA self-assembly
Nature · 2019
248
cited
Enzyme-Free Nucleic Acid Logic Circuits
Science · 2006
245
cited
An information-bearing seed for nucleating algorithmic self-assembly
Proceedings of the National Academy of Sciences of the United States of America · 2009
242
cited
Two computational primitives for algorithmic self-assembly: copying and counting.
Nano letters (Print) · 2005
233
cited
Timing molecular motion and production with a synthetic transcriptional clock
Proceedings of the National Academy of Sciences of the United States of America · 2011
227
cited
Sotabase