Sotabase

Career

· Postdoctoral Researcher, Stanford University2024–
· Fulbright Ireland HRB-HealthImpact Scholar, Stanford University2020–
· Host Mentor, Stanford University2014–
· HR Manager, Stanford Federal Credit Union
· Diving Scholarship Recipient, Stanford University
· Postdoc Computational Drug Discovery, Stanford University

Publications (55)

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA
Bioinform. · 2015
372
cited
Composition and dynamics of the respiratory tract microbiome in intubated patients
Microbiome · 2016
174
cited
Enterococci enhance Clostridioides difficile pathogenesis
Nature · 2022
146
cited
Challenges and Opportunities with Causal Discovery Algorithms: Application to Alzheimer’s Pathophysiology
Scientific Reports · 2020
144
cited
Predicting Short-term MCI-to-AD Progression Using Imaging, CSF, Genetic Factors, Cognitive Resilience, and Demographics
Scientific Reports · 2019
75
cited
Newer glycopeptide antibiotics for treatment of complicated skin and soft tissue infections: systematic review, network meta-analysis and cost analysis.
Clinical Microbiology and Infection · 2017
69
cited
Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania
mBio · 2022
54
cited
Clinical Practice and Infrastructure Review of Fecal Microbiota Transplantation for Clostridium difficile Infection
Chest · 2018
45
cited
Management of influenza symptoms in healthy children: cost-effectiveness of rapid testing and antiviral therapy.
Archives of Pediatrics & Adolescent Medicine · 2005
44
cited
Combined Biomarkers Predict Acute Mortality Among Critically Ill Patients With Suspected Sepsis*
Critical Care Medicine · 2018
37
cited
Molecular analysis of bacterial contamination on stethoscopes in an intensive care unit
Infection control and hospital epidemiology · 2018
33
cited
Impact of Levofloxacin for the Prophylaxis of Bloodstream Infection on the Gut Microbiome in Patients With Hematologic Malignancy
Open Forum Infectious Diseases · 2018
31
cited
Dynamic Changes in the Nasal Microbiome Associated With Disease Activity in Patients With Granulomatosis With Polyangiitis
Arthritis & Rheumatology · 2021
25
cited
Quantitation of HIV DNA integration: effects of differential integration site distributions on Alu-PCR assays.
Journal of Virological Methods · 2013
25
cited
Combined biomarkers discriminate a low likelihood of bacterial infection among surgical intensive care unit patients with suspected sepsis.
Diagnostic microbiology and infectious disease · 2016
23
cited
SARS-CoV-2 Delta Variant (AY.3) in the Feces of a Domestic Cat
Viruses · 2022
22
cited
Signs of the 2009 Influenza Pandemic in the New York-Presbyterian Hospital Electronic Health Records
PLoS ONE · 2010
18
cited
Gut microbiota features associated with Clostridioides difficile colonization in puppies
PLoS ONE · 2019
17
cited
Quantifying the Impact of Nasopharyngeal Specimen Quality on Severe Acute Respiratory Syndrome Coronavirus 2 Test Performance
Open Forum Infectious Diseases · 2021
17
cited
Infrequent intrahousehold transmission of Clostridioides difficile between pet owners and their pets
Zoonoses and Public Health · 2023
14
cited
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Brendan Kelly | Researcher Profile | Sotabase | Sotabase