Sotabase

Career

· Senior Research Scientist, Lawrence Berkeley National Laboratory
· Adjunct Associate Professor of EECS, UC Berkeley

Publications (170)

Recent Advances in Graph Partitioning
Algorithm Engineering · 2013
599
cited
Parallel sparse matrix-vector and matrix-transpose-vector multiplication using compressed sparse blocks
ACM Symposium on Parallelism in Algorithms and Architectures · 2009
447
cited
The Combinatorial BLAS: design, implementation, and applications
The international journal of high performance computing applications · 2011
429
cited
Critical Assessment of Metagenome Interpretation: the second round of challenges
Nature Methods · 2021
271
cited
A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome
Genome Biology · 2015
257
cited
Parallel breadth-first search on distributed memory systems
2011 International Conference for High Performance Computing, Networking, Storage and Analysis (SC) · 2011
251
cited
Mathematical foundations of the GraphBLAS
IEEE Conference on High Performance Extreme Computing · 2016
242
cited
Parallel Sparse Matrix-Matrix Multiplication and Indexing: Implementation and Experiments
SIAM Journal on Scientific Computing · 2011
218
cited
On the representation and multiplication of hypersparse matrices
2008 IEEE International Symposium on Parallel and Distributed Processing · 2008
212
cited
Parallel Triangle Counting and Enumeration Using Matrix Algebra
2015 IEEE International Parallel and Distributed Processing Symposium Workshop · 2015
148
cited
HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks
Nucleic Acids Research · 2018
133
cited
Reduced-Bandwidth Multithreaded Algorithms for Sparse Matrix-Vector Multiplication
IEEE International Parallel and Distributed Processing Symposium · 2011
133
cited
Challenges and Advances in Parallel Sparse Matrix-Matrix Multiplication
International Conference on Parallel Processing · 2008
130
cited
Solving path problems on the GPU
Parallel Computing · 2010
125
cited
Unraveling the functional dark matter through global metagenomics
Nature · 2023
123
cited
Design Principles for Sparse Matrix Multiplication on the GPU
European Conference on Parallel Processing · 2018
121
cited
Reducing Communication in Graph Neural Network Training
International Conference for High Performance Computing, Networking, Storage and Analysis · 2020
120
cited
GraphBLAST: A High-Performance Linear Algebra-based Graph Framework on the GPU
ACM Transactions on Mathematical Software · 2019
119
cited
Communication optimal parallel multiplication of sparse random matrices
ACM Symposium on Parallelism in Algorithms and Architectures · 2013
117
cited
Exploiting Multiple Levels of Parallelism in Sparse Matrix-Matrix Multiplication
SIAM Journal on Scientific Computing · 2015
110
cited
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Aydin Buluç | Researcher Profile | Sotabase | Sotabase