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Career

· Researcher, Massachusetts Institute of Technology (MIT) Julia Lab

Publications (12)

A Novel Method for Predicting Ribosomal RNA Genes in Prokaryotic Genomes
2017
34
cited
Catalyst: Fast and flexible modeling of reaction networks
bioRxiv · 2023
31
cited
Tunable phenotypic variability through an autoregulatory alternative sigma factor circuit
bioRxiv · 2020
15
cited
Catalyst: Fast Biochemical Modeling with Julia
2022
11
cited
NonlinearSolve.jl: High-Performance and Robust Solvers for Systems of Nonlinear Equations in Julia
ACM Transactions on Mathematical Software · 2024
11
cited
The σB alternative sigma factor circuit modulates noise to generate different types of pulsing dynamics
PLoS Comput. Biol. · 2023
2
cited
Exact identifiability analysis for a class of partially observed near-linear stochastic differential equation models
2025
1
cited
Mixed positive and negative feedback loops drive diverse single-cell gene expression dynamics
bioRxiv · 2025
1
cited
A BRC1-modulated switch in auxin efflux accounts for the competition between Arabidopsis axillary buds
PLoS Biology · 2025
A BRC1-modulated switch in auxin transport accounts for the competition between Arabidopsis axillary buds
bioRxiv · 2025
Correction: Catalyst: Fast and flexible modeling of reaction networks
PLoS Comput. Biol. · 2025
Functional and parametric identifiability for universal differential equations applied to chemical reaction networks
2025
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Torkel Loman | Researcher Profile | Sotabase | Sotabase