Sotabase

Career

· Postdoctoral Researcher, UC Berkeley
· Postdoctoral Researcher, University of California, Berkeley
· Professor, University of California, Berkeley

Publications (18)

A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
Genome Research · 2014
456
cited
Faster and More Accurate Sequence Alignment with SNAP
arXiv.org · 2011
291
cited
A Million Cancer Genome Warehouse
2012
18
cited
Fuzzy set intersection based paired-end short-read alignment
bioRxiv · 2021
6
cited
Abstract P3-08-02: Multi-gene panel testing for hereditary cancer predisposition in unsolved high risk breast and ovarian cancer patients
2017
A Metagenomic Analysis of Pandemic Influenza A (2009 H1N1) Infection in Patients from North America
2010
A Novel Rhabdovirus Associated with Acute Hemorrhagic Fever in Central Africa
2012
Concerted Potent Humoral Immune Responses to Autoantigens Are Associated with Tumor Destruction and Favorable Clinical Outcomes without Autoimmunity
2008
Conserved pathways within bacteria and yeast as revealed by global protein network alignment
2003
Correction: A Novel Rhabdovirus Associated with Acute Hemorrhagic Fever in Central Africa
2016
Correction: Correction: A Novel Rhabdovirus Associated with Acute Hemorrhagic Fever in Central Africa
2017
From the Cover : Conserved patterns of protein interaction in multiple species
2005
Multi-gene panel testing for hereditary cancer predisposition in unsolved high-risk breast and ovarian cancer patients
2017
Performance of a Convolutional Neural Network and Explainability Technique for 12-Lead Electrocardiogram Interpretation.
2021
Prospective registry of multiplex testing (PROMPT): A web-based platform to assess cancer risk of genetic variants.
2016
The Plasmodium protein network diverges from those of other eukaryotes
2005
Toward an Understanding of Changes in Diversity Associated with Fecal Microbiome Transplantation Based on 16S rRNA Gene Deep Sequencing
2012
Using Multitask Learning to Improve 12-Lead Electrocardiogram Classification
2018
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Taylor Sittler | Researcher Profile | Sotabase | Sotabase