Sotabase

Career

· Researcher, Massachusetts Institute of Technology (MIT) Interactive Robotics Group

Publications (65)

Structural classification of zinc fingers: survey and summary.
Nucleic Acids Research · 2003
862
cited
Exploration of Uncharted Regions of the Protein Universe
PLoS Biology · 2009
131
cited
CASP5 assessment of fold recognition target predictions
Proteins: Structure, Function, and Bioinformatics · 2003
100
cited
Crystal structures of two novel dye‐decolorizing peroxidases reveal a β‐barrel fold with a conserved heme‐binding motif
Proteins: Structure, Function, and Bioinformatics · 2007
79
cited
Structural Biology and Crystallization Communications
78
cited
Structural basis of murein peptide specificity of a gamma-D-glutamyl-l-diamino acid endopeptidase.
Structure · 2009
69
cited
Crystal structure of the first eubacterial Mre11 nuclease reveals novel features that may discriminate substrates during DNA repair.
Journal of Molecular Biology · 2010
45
cited
Structurally analogous proteins do exist!
Structure · 2004
45
cited
Searching for three-dimensional secondary structural patterns in proteins with ProSMoS
Bioinform. · 2007
41
cited
A zinc-binding dual-specificity YVH1 phosphatase in the malaria parasite, Plasmodium falciparum, and its interaction with the nuclear protein, pescadillo.
Molecular and biochemical parasitology (Print) · 2004
37
cited
Bacterial Pleckstrin Homology Domains: A Prokaryotic Origin for the PH Domain
Journal of Molecular Biology · 2010
36
cited
Structural Biology and Crystallization Communications Structure of a Membrane-attack Complex/perforin (macpf) Family Protein from the Human Gut Symbiont Bacteroides Thetaiotaomicron
36
cited
Structural studies on the empty capsids of Physalis mottle virus.
Journal of Molecular Biology · 2001
30
cited
Crystal structure of the Fic (Filamentation induced by cAMP) family protein SO4266 (gi|24375750) from Shewanella oneidensis MR‐1 at 1.6 Å resolution
Proteins: Structure, Function, and Bioinformatics · 2009
28
cited
Structural and Functional Characterizations of SsgB, a Conserved Activator of Developmental Cell Division in Morphologically Complex Actinomycetes*
Journal of Biological Chemistry · 2009
27
cited
Identification of a discrete intermediate in the assembly/disassembly of physalis mottle tymovirus through mutational analysis.
Journal of Molecular Biology · 1999
26
cited
Crystal structure of a novel Sm‐like protein of putative cyanophage origin at 2.60 Å resolution
Proteins: Structure, Function, and Bioinformatics · 2009
24
cited
Structural Biology and Crystallization Communications Structure of an Essential Bacterial Protein Yeaz (tm0874) from Thermotoga Maritima at 2.5 a ˚ Resolution
20
cited
Representing and comparing protein structures as paths in three-dimensional space
BMC Bioinformatics · 2006
19
cited
The Finger Domain of the Human Deubiquitinating Enzyme HAUSP is a Zinc Ribbon
Cell Cycle · 2004
19
cited
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