Sotabase

Career

· Researcher in Clinical Machine Learning Group, MIT CSAIL2024–
· PhD Student, Broad Institute2019–2025
· PhD in Electrical Engineering & Computer Science, Massachusetts Institute of Technology2019–2025
· PhD Student, MIT CSAIL2019–2025
· MSc in Biomedical Engineering, Columbia University2016–
· BA in Physics, Yeshiva University2014–
· Worked on the Molecular Profiling team, Regeneron Pharmaceuticals

Publications (27)

Single cell characterization of myeloma and its precursor conditions reveals transcriptional signatures of early tumorigenesis
Nature Communications · 2022
54
cited
A Deep Dive into Single-Cell RNA Sequencing Foundation Models
bioRxiv · 2023
41
cited
Deep Contextual Clinical Prediction with Reverse Distillation
AAAI Conference on Artificial Intelligence · 2020
26
cited
Deeper evaluation of a single-cell foundation model
Nature Machine Intelligence · 2024
15
cited
Joint AI-driven event prediction and longitudinal modeling in newly diagnosed and relapsed multiple myeloma
npj Digital Medicine · 2024
9
cited
Inhibition of MICA and MICB shedding enhances memory-like NK-cell–mediated cytotoxicity against multiple myeloma
Blood Advances · 2024
4
cited
HiDDEN: A machine learning label refinement method for detection of disease-relevant populations in case-control single-cell transcriptomics
bioRxiv · 2023
2
cited
Single-Cell Profiling of ~1.7 Million Plasma Cells across >250 Individuals Reveals Transcriptional Signatures of Progression and Clonal Expansion in Multiple Myeloma and Its Precursor Stages
Blood · 2024
1
cited
Abstract PR-006: Integrative genomic characterization of therapeutic targets for pancreatic cancer
Big Data · 2021
A Diffusion-Based Autoencoder for Learning Patient-Level Representations from Single-Cell Data
bioRxiv · 2025
Inhibition of MICA and MICB Shedding Enhances Cytokine-Induced Memory-like NK Cell-Mediated Activity Against Multiple Myeloma
Blood · 2022
P-021: 7C6 is a novel monoclonal antibody that induces enhanced anti-myeloma activity of cytokine induced memory-like (CIML) NK cells by blocking MICA/B shedding and antibodydependent cell cytotoxicity
Clinical Lymphoma, Myeloma & Leukemia · 2022
Single-Cell RNA-Sequencing of 245 Tumor Samples from Patients with MGUS and Smoldering Multiple Myeloma Reveals Novel Insights into Malignant Plasma Cell Biology
Blood · 2022
Sotabase
Rebecca Boiarsky | Researcher Profile | Sotabase | Sotabase