Sotabase

Career

· Research Intern, Genentech2023–
· PhD in Computer Science, Stanford University2021–

Publications (108)

Scientific discovery in the age of artificial intelligence
Nature · 2023
1,351
cited
ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission
arXiv.org · 2019
1,148
cited
Building a knowledge graph to enable precision medicine
bioRxiv · 2022
432
cited
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development
NeurIPS Datasets and Benchmarks · 2021
377
cited
DeepPurpose: a deep learning library for drug–target interaction prediction
Bioinform. · 2020
374
cited
The Influences of Climate Change and Human Activities on Vegetation Dynamics in the Qinghai-Tibet Plateau
Remote Sensing · 2016
272
cited
Graph representation learning in biomedicine and healthcare
Nature Biomedical Engineering · 2021
256
cited
Predicting transcriptional outcomes of novel multigene perturbations with GEARS
Nature Biotechnology · 2023
245
cited
Graph Meta Learning via Local Subgraphs
Neural Information Processing Systems · 2020
184
cited
Artificial intelligence foundation for therapeutic science
Nature Chemical Biology · 2022
160
cited
Effects of building density on land surface temperature in China: Spatial patterns and determinants
2020
159
cited
SkipGNN: predicting molecular interactions with skip-graph networks
Scientific Reports · 2020
138
cited
Water availability is more important than temperature in driving the carbon fluxes of an alpine meadow on the Tibetan Plateau
Agricultural and Forest Meteorology · 2018
127
cited
Elevation‐dependent effects of climate change on vegetation greenness in the high mountains of southwest China during 1982–2013
2018
103
cited
Uncertainty Quantification over Graph with Conformalized Graph Neural Networks
Neural Information Processing Systems · 2023
85
cited
Biomni: A General-Purpose Biomedical AI Agent
bioRxiv · 2025
82
cited
Biological and climate factors co-regulated spatial-temporal dynamics of vegetation autumn phenology on the Tibetan Plateau
International Journal of Applied Earth Observation and Geoinformation · 2018
78
cited
Enhanced dominance of soil moisture stress on vegetation growth in Eurasian drylands
National Science Review · 2023
66
cited
Extending the Nested Model for User-Centric XAI: A Design Study on GNN-based Drug Repurposing
IEEE Transactions on Visualization and Computer Graphics · 2022
64
cited
Therapeutics Data Commons: Machine Learning Datasets and Tasks for Therapeutics
arXiv.org · 2021
61
cited
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Kexin Huang | Researcher Profile | Sotabase | Sotabase