Sotabase

Career

· Postdoctoral Research Associate, University of Illinois Chicago2024–
· Course Instructor - PREP-ME 2.0, University of Illinois Chicago2021–2021
· Tutor - Engineering Learning Center, University of Illinois Chicago2021–2024
· Graduate Student - Materials Engineering, University of Illinois Chicago2018–2024
· Undergraduate Student Researcher, NASA2016–2018
· Student Intern, NASA - National Aeronautics and Space Administration2016–2016
· Bachelor of Science - BS, Chemistry, Summa Cum Laude, Xavier University of Louisiana2014–2018
· Undergraduate Student Researcher, Xavier University of Louisiana2014–2018

Publications (210)

Overview of the HUPO Plasma Proteome Project: Results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly‐available database
Proteomics · 2005
792
cited
Toward a Human Blood Serum Proteome
Molecular & Cellular Proteomics · 2002
750
cited
Supplement to: Omic Data from Evolved Strains are Consistent with Computed Optimal Growth States
2010
699
cited
The Human Plasma Proteome
Molecular & Cellular Proteomics · 2004
699
cited
Activated ClpP kills persisters and eradicates a chronic biofilm infection
Nature · 2013
624
cited
Persister formation in Staphylococcus aureus is associated with ATP depletion
Nature Microbiology · 2016
562
cited
Normalization approaches for removing systematic biases associated with mass spectrometry and label-free proteomics.
Journal of Proteome Research · 2006
427
cited
An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: Sensitivity and specificity analysis
Proteomics · 2005
360
cited
Utilizing human blood plasma for proteomic biomarker discovery.
Journal of Proteome Research · 2005
313
cited
In silico method for modelling metabolism and gene product expression at genome scale
Nature Communications · 2012
282
cited
Distance restraints from crosslinking mass spectrometry: Mining a molecular dynamics simulation database to evaluate lysine–lysine distances
Protein Science · 2014
279
cited
Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data
BMC Bioinformatics · 2009
226
cited
Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation.
Genome Research · 2007
206
cited
VIPER: an advanced software package to support high-throughput LC-MS peptide identification
Bioinform. · 2007
192
cited
MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) features
Comput. Biol. Chem. · 2008
183
cited
Phage-specific metabolic reprogramming of virocells
The ISME Journal · 2020
181
cited
High-Throughput Single Cell Proteomics Enabled by Multiplex Isobaric Labelling in a Nanodroplet Sample Preparation Platform.
Analytical Chemistry · 2019
174
cited
Comprehensive computational design of ordered peptide macrocycles
Science · 2017
173
cited
A statistical framework for protein quantitation in bottom-up MS-based proteomics
Bioinform. · 2009
165
cited
Improved peptide elution time prediction for reversed-phase liquid chromatography-MS by incorporating peptide sequence information.
Analytical Chemistry · 2006
162
cited
Sotabase