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Career

· Research Scientist, UC Berkeley EECS and Berkeley AI Research Lab2024–
· Research Scientist, UC Berkeley EECS department

Publications (31)

Advanced methods of microscope control using μManager software.
Journal of Biological Methods · 2014
1,789
cited
Deep learning for single-shot autofocus microscopy
Optica · 2019
119
cited
Pycro-Manager: open-source software for customized and reproducible microscope control
Nature Methods · 2020
90
cited
Quantitative Clonal Analysis and Single-Cell Transcriptomics Reveal Division Kinetics, Hierarchy, and Fate of Oral Epithelial Progenitor Cells.
Cell Stem Cell · 2019
68
cited
ARC-AGI-2: A New Challenge for Frontier AI Reasoning Systems
arXiv.org · 2025
64
cited
Learned adaptive multiphoton illumination microscopy for large-scale immune response imaging
Nature Communications · 2021
25
cited
Micro-Magellan: open-source, sample-adaptive, acquisition software for optical microscopy
Nature Methods · 2016
25
cited
Tracking the Spatial and Functional Gradient of Monocyte-To-Macrophage Differentiation in Inflamed Lung
PLoS ONE · 2016
12
cited
Information-driven design of imaging systems
2024
9
cited
Microscopes are coming for your job
Nature Methods · 2022
9
cited
Limb phase flexibility in walking: a test case in the squirrel monkey (Saimiri sciureus)
Frontiers in Zoology · 2019
8
cited
Spatiotemporal Rank Filtering Improves Image Quality Compared to Frame Averaging in 2-Photon Laser Scanning Microscopy
PLoS ONE · 2016
7
cited
Image denoising for fluorescence microscopy by self-supervised transfer learning
bioRxiv · 2021
6
cited
Assessing and benchmarking multiphoton microscopes for biologists.
Methods in Cell Biology · 2014
4
cited
A visual introduction to information theory
arXiv.org · 2022
4
cited
Designing lensless imaging systems to maximize information capture
Optica · 2025
3
cited
Learned adaptive multiphoton illumination microscopy
bioRxiv · 2020
3
cited
Single-shot autofocus microscopy using deep learning
bioRxiv · 2019
3
cited
Computationally Efficient Information-Driven Optical Design with Interchanging Optimization
arXiv.org · 2025
2
cited
Information-Theoretic Design for High-Dimensional Computational Imaging
Optica Imaging Congress 2024 (3D, AOMS, COSI, ISA, pcAOP) · 2024
2
cited
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