Sotabase

Career

· Research and diagnostic services provider, UCLA Clinical Genomics Center | Clinical and Translational Science Institute2025–
· Participant/Researcher, UCLA Bruins-in-Genomics Summer Undergraduate Research Program2015–
· Alumni, UCLA Computational Medicine2008–

Publications (100)

SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes.
Molecular biology and evolution · 2016
479
cited
HIV persists throughout deep tissues with repopulation from multiple anatomical sources.
Journal of Clinical Investigation · 2020
191
cited
HIV Rebound Is Predominantly Fueled by Genetically Identical Viral Expansions from Diverse Reservoirs.
Cell Host and Microbe · 2019
142
cited
Measles virus and rinderpest virus divergence dated to the sixth century BCE
Science · 2020
118
cited
The Genealogical Population Dynamics of HIV-1 in a Large Transmission Chain: Bridging within and among Host Evolutionary Rates
PLoS Comput. Biol. · 2014
86
cited
Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza
Nature Communications · 2019
82
cited
Distinct Effects of T-705 (Favipiravir) and Ribavirin on Influenza Virus Replication and Viral RNA Synthesis
Antimicrobial Agents and Chemotherapy · 2016
82
cited
Predicting the evolution of the Lassa virus endemic area and population at risk over the next decades
bioRxiv · 2021
75
cited
Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework
Nature Communications · 2020
62
cited
Host ecology determines the dispersal patterns of a plant virus
Virus Evolution · 2015
60
cited
Recent advances in computational phylodynamics.
Current Opinion in Virology · 2018
51
cited
Comparative Circulation Dynamics of the Five Main HIV Types in China
Journal of Virology · 2020
48
cited
A systematic review on global RSV genetic data: Identification of knowledge gaps
Reviews in Medical Virology · 2021
45
cited
Transmission dynamics of re-emerging rabies in domestic dogs of rural China
PLoS Pathogens · 2018
44
cited
Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic
Nature Communications · 2022
43
cited
Discovery and genome characterization of three new Jeilongviruses, a lineage of paramyxoviruses characterized by their unique membrane proteins
BMC Genomics · 2018
43
cited
Genomic Epidemiology of 2015–2016 Zika Virus Outbreak in Cape Verde
Emerging Infectious Diseases · 2020
35
cited
On the importance of negative controls in viral landscape phylogeography
Virus Evolution · 2018
32
cited
Extensive characterization of HIV-1 reservoirs reveals links to plasma viremia before and during analytical treatment interruption
bioRxiv · 2021
31
cited
Bidirectional Movement of Emerging H5N8 Avian Influenza Viruses Between Europe and Asia via Migratory Birds Since Early 2020
Molecular biology and evolution · 2023
30
cited
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Hana Vrancken | Researcher Profile | Sotabase | Sotabase