Sotabase

Career

· Undergraduate in Computer Science, UC Berkeley2013–2017
· PhD in Computer Science, UC Berkeley

Publications (57)

Frequent mutation of histone modifying genes in non-Hodgkin lymphoma
Nature · 2011
1,619
cited
Genome-wide discovery of somatic coding and noncoding mutations in pediatric endemic and sporadic Burkitt lymphoma.
Blood · 2019
204
cited
CancerMine: a literature-mined resource for drivers, oncogenes and tumor suppressors in cancer
Nature Methods · 2018
172
cited
Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer
Clinical Cancer Research · 2017
146
cited
Pan-cancer analysis of advanced patient tumors reveals interactions between therapy and genomic landscapes
Nature Cancer · 2020
129
cited
Genome-wide discovery of somatic regulatory variants in diffuse large B-cell lymphoma
Nature Communications · 2018
118
cited
Lessons learned from the application of whole-genome analysis to the treatment of patients with advanced cancers
Cold Spring Harbor molecular case studies · 2015
118
cited
Monitoring and adapting cancer treatment using circulating tumor DNA kinetics: Current research, opportunities, and challenges
Science Advances · 2022
118
cited
Homologous Recombination Deficiency in Breast Cancer: A Clinical Review.
JCO Precision Oncology · 2017
74
cited
Whole-Genome Sequencing in Cancer.
Cold Spring Harbor Perspectives in Medicine · 2018
50
cited
On-Demand Sampling: Learning Optimally from Multiple Distributions
Neural Information Processing Systems · 2022
46
cited
Comprehensive genomic profiling of glioblastoma tumors, BTICs, and xenografts reveals stability and adaptation to growth environments
Proceedings of the National Academy of Sciences of the United States of America · 2019
42
cited
Molecular characterization of metastatic pancreatic neuroendocrine tumors (PNETs) using whole-genome and transcriptome sequencing
Cold Spring Harbor molecular case studies · 2018
40
cited
A Guide to Single-Cell Transcriptomics in Adult Rodent Brain: The Medium Spiny Neuron Transcriptome Revisited
Frontiers in Cellular Neuroscience · 2018
39
cited
Base excision repair deficiency signatures implicate germline and somatic MUTYH aberrations in pancreatic ductal adenocarcinoma and breast cancer oncogenesis
Cold Spring Harbor molecular case studies · 2019
35
cited
Investigation of PD-L1 Biomarker Testing Methods for PD-1 Axis Inhibition in Non-squamous Non–small Cell Lung Cancer
Journal of Histochemistry and Cytochemistry · 2016
33
cited
Whole genome and whole transcriptome genomic profiling of a metastatic eccrine porocarcinoma
npj Precision Oncology · 2018
24
cited
A Unifying Perspective on Multi-Calibration: Game Dynamics for Multi-Objective Learning
Neural Information Processing Systems · 2023
23
cited
Endoscopic ultrasound-directed transgastric ERCP (EDGE): A multicenter US study on long-term follow-up and fistula closure
Endoscopy International Open · 2022
23
cited
Genomic characterization of a well-differentiated grade 3 pancreatic neuroendocrine tumor
Cold Spring Harbor molecular case studies · 2019
23
cited
Sotabase
Eric Zhao | Researcher Profile | Sotabase | Sotabase