Sotabase

Career

· Executive Director, 2i2c2020–
· Distinguished Contributor, Project Jupyter2017–
· Scientific Council Member, International Computer Science Institute (ICSI)
· B.S. in Neuroscience, Tulane University
· M.S. in Neuroscience, Tulane University
· Ph.D. in Neuroscience, University of California, Berkeley
· Post-Doctoral Researcher, University of California, Berkeley

Publications (37)

Binder 2.0 - Reproducible, interactive, sharable environments for science at scale
SciPy · 2018
283
cited
Gender bias in academia: A lifetime problem that needs solutions
Neuron · 2021
250
cited
Decoding spectrotemporal features of overt and covert speech from the human cortex
Frontiers in Neuroengineering · 2014
206
cited
Encoding and Decoding Models in Cognitive Electrophysiology
Frontiers in Systems Neuroscience · 2017
137
cited
iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology
Scientific Data · 2019
131
cited
MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis
Journal of Open Source Software · 2019
115
cited
Rapid tuning shifts in human auditory cortex enhance speech intelligibility
Nature Communications · 2016
84
cited
PyBIDS: Python tools for BIDS datasets
Journal of Open Source Software · 2019
46
cited
Encoding and Decoding Neuronal Dynamics: Methodological Framework to Uncover the Algorithms of Cognition
2017
38
cited
The Types, Roles, and Practices of Documentation in Data Analytics Open Source Software Libraries
Computer Supported Cooperative Work (CSCW) · 2018
36
cited
Reproducible Research Environments with Repo2Docker
2018
31
cited
Cloud-based framework for inter-comparing submesoscale-permitting realistic ocean models
Geoscientific Model Development · 2022
30
cited
Science Storms the Cloud
AGU Advances · 2021
22
cited
Portable Learning Environments for Hands-On Computational Instruction: Using Container- and Cloud-Based Technology to Teach Data Science
Practice and Experience in Advanced Research Computing · 2017
19
cited
Reproducibly sampling SARS-CoV-2 genomes across time, geography, and viral diversity.
F1000Research · 2020
17
cited
Beyond advertising: New infrastructures for publishing integrated research objects
PLoS Comput. Biol. · 2022
13
cited
BIDS-iEEG: an extension to the brain imaging data structure (BIDS) specification for human intracranial electrophysiology
2018
10
cited
EarthPy: A Python package that makes it easier to explore and plot raster and vector data using open source Python tools
Journal of Open Source Software · 2019
10
cited
Reproducing Machine Learning Research on Binder
2018
9
cited
Combined process automation for large-scale EEG analysis
Comput. Biol. Medicine · 2012
7
cited
Sotabase
Christopher Holdgraf | Researcher Profile | Sotabase | Sotabase