Sotabase

Career

· Staff Scientist, Bioinformatics, Thermo Fisher Scientific2024–
· Postdoctoral Researcher, Stanford University2015–2024
· PhD Student, Stanford University
· PhD Student, Weizmann Institute of Science

Publications (0)

Frustration in protein–DNA binding influences conformational switching and target search kinetics
Proceedings of the National Academy of Sciences of the United States of America · 2011
120
cited
Obstacles may facilitate and direct DNA search by proteins.
Biophysical Journal · 2013
55
cited
"Reverse Genomics" Predicts Function of Human Conserved Noncoding Elements.
Molecular biology and evolution · 2016
52
cited
Mx1 and Mx2 key antiviral proteins are surprisingly lost in toothed whales
Proceedings of the National Academy of Sciences of the United States of America · 2015
48
cited
A functional enrichment test for molecular convergent evolution finds a clear protein-coding signal in echolocating bats and whales
Proceedings of the National Academy of Sciences of the United States of America · 2019
47
cited
Weak frustration regulates sliding and binding kinetics on rugged protein-DNA landscapes.
Journal of Physical Chemistry B · 2013
35
cited
Nonnative interactions regulate folding and switching of myristoylated protein
Proceedings of the National Academy of Sciences of the United States of America · 2012
32
cited
Asymmetric DNA-search dynamics by symmetric dimeric proteins.
Biochemistry · 2013
27
cited
Arc-repressor dimerization on DNA: folding rate enhancement by colocalization.
Biophysical Journal · 2009
23
cited
Chapter 10:Sliding Dynamics Along DNA: A Molecular Perspective
2012
16
cited
Water organization between oppositely charged surfaces: implications for protein sliding along DNA.
Journal of Chemical Physics · 2015
13
cited
A fully-automated method discovers loss of mouse-lethal and human-monogenic disease genes in 58 mammals
Nucleic Acids Research · 2020
11
cited
A novel unbiased test for molecular convergent evolution and discoveries in echolocating, aquatic and high-altitude mammals
bioRxiv · 2017
6
cited
Abstract 215: Oncomineprecision assay - an integrated and automatic next generation sequencing workflow for both FFPE tissue and plasma based cancer research
Molecular and Cellular Biology / Genetics · 2020
2
cited
Loss of critical developmental and human disease-causing genes in 58 mammals
bioRxiv · 2019
2
cited
Transition from Nonspecific to Specific DNA Recognition: Weak Frustration can Regulate Search Kinetics
2012
1
cited
Abstract 177: RNA sequencing based gene fusion detection with oncomine comprehensive assay plus
Molecular and Cellular Biology / Genetics · 2020
Abstract 179: Comprehensive genomic profiling of solid tumors for key targeted and immuno-oncology biomarkers using Ion Torrent NGS technology on the Oncomine Comprehensive Assay Plus (OCA Plus)
Molecular and Cellular Biology / Genetics · 2020
Abstract 213: Demonstration of the genexus integrated sequencing system with the oncomine precision assay
Molecular and Cellular Biology / Genetics · 2020
Abstract 232: Fully automated comprehensive genomic profiling for detection of cancer variants, gene fusions, and complex oncology endpoints
Cancer Research · 2023
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